Hi Yan,
No, there is currently no support for that.
Sorry,
Sjors
On 01/19/2016 03:16 PM, Yan Zhang wrote:
> Hi Sjors,
>
> I was wondering that whether there is any possibility to take the CTF
> parameters determined by ctftilt into relion?
>
> Thanks,
> Yan
>
> On Tue, Jan 19, 2016 at 3:10 AM, Sjors Scheres <[log in to unmask]>
> wrote:
>
>> Hi Grigory,
>> Yes, that behaviour will be in relion-2.0. Hopefully ready by about summer
>> time.
>> HTH,
>> Sjors
>>
>>
>>> Hello Sjors,
>>>
>>> I have just figured out that relion_preprocess command, when used during
>>> particle extraction, needs ctffind log files in order to populate
>>> particles
>>> star file with ctf values. I was surprised since I have all values in
>>> micrograph star file, defined by --mic_star option. I thought I could
>>> safely remove log files since all info is now contained within star files
>>> (luckily, I had a backup, and didn't have to redo CTF). Is there some
>>> hidden logic behind such behavior? I think it would be handy if relion
>>> could grep values from input star file, since user explicitly defines it
>>> during particle extraction.
>>>
>>>
>>> Best regards,
>>> Grigory
>>>
>>>
>> --------------------------------------------------------------------------------
>>> Grigory Sharov, Ph.D.
>>> Institute of Genetics and Molecular and Cellular Biology
>>> Integrated Structural Biology Department (CBI)
>>> 1, rue Laurent Fries
>>> 67404 Illkirch, France
>>> tel. 03 69 48 51 00
>>> e-mail: [log in to unmask]
>>>
>>
>> --
>> Sjors Scheres
>> MRC Laboratory of Molecular Biology
>> Francis Crick Avenue, Cambridge Biomedical Campus
>> Cambridge CB2 0QH, U.K.
>> tel: +44 (0)1223 267061
>> http://www2.mrc-lmb.cam.ac.uk/groups/scheres
>>
--
Sjors Scheres
MRC Laboratory of Molecular Biology
Francis Crick Avenue, Cambridge Biomedical Campus
Cambridge CB2 0QH, U.K.
tel: +44 (0)1223 267061
http://www2.mrc-lmb.cam.ac.uk/groups/scheres
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