You can do this with Connectome Workbench wb_command
-surface-apply-affine. Also, the next version of FreeSurfer should have
options in mris_convert so that FreeSurfer can handle this for you
automatically. There might be a FreeSurfer way to do this in the current
version, so you might ask this question on the FreeSurfer list too.
Peace,
Matt.
On 9/26/15, 8:51 PM, "FSL - FMRIB's Software Library on behalf of Martin
Tisdall" <[log in to unmask] on behalf of [log in to unmask]> wrote:
>Is their a way of using FLIRT to apply a linear transformation to a
>surface (as opposed to a volume)
>I am trying to move a freesurfer derived Pial surface into real RAS space
>so it is concord ant with the original MRI.
>I have the 4x4 transformation matrix as an asci file.
>If this is it possible then is there another way.
>Thanks Martin
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