Dear CCP4BB_Members,
I am trying to run xia2 within ccp4 and it failed. Please see the
error message enclosed below. Could someone give any hints of a fix?
Thank you in advance.
Regards,
Hena
#CCP4I VERSION CCP4Interface 6.5.016
#CCP4I SCRIPT LOG xia2
#CCP4I DATE 23 Sep 2015 12:26:22
#CCP4I USER huang
#CCP4I PROJECT ric-p422
#CCP4I JOB_ID 27
#CCP4I SCRATCH /tmp
#CCP4I HOSTNAME vinculin
#CCP4I PID 9442
***************************************************************************
* Information from CCP4Interface script
***************************************************************************
The program run with command: xia2 -2d -xinfo xia2_27.xinfo
has failed with error message
Traceback (most recent call last):
File "/home/program/destination/ccp4-6.5/share/xia2/Applications/xia2.py",
line 38, in <module>
from xia2setup import write_xinfo
File "/home/program/destination/ccp4-6.5/share/xia2/Applications/xia2setup.py",
line 32, in <module>
from Handlers.CommandLine import CommandLine
File "/home/program/destination/ccp4-6.5/share/xia2/Handlers/CommandLine.py",
line 1576, in <module>
CommandLine.setup()
File "/home/program/destination/ccp4-6.5/share/xia2/Handlers/CommandLine.py",
line 340, in setup
(self._help_xinfo(), str(e))
RuntimeError: -xinfo example.xinfo (START_END start end, not "START_END")
***************************************************************************
#CCP4I TERMINATION STATUS 0 "Traceback (most recent call last): File
"/home/program/destination/ccp4-6.5/share/xia2/Applications/xia2.py",
line 38, in <module> from xia2setup import write_xinfo File
"/home/program/destination/ccp4-6.5/share/xia2/Applications/xia2setup.py",
line 32, in <module> from Handlers.CommandLine import CommandLine
File "/home/program/destination/ccp4-6.5/share/xia2/Handlers/CommandLine.py",
line 1576, in <module> CommandLine.setup() File
"/home/program/destination/ccp4-6.5/share/xia2/Handlers/CommandLine.py",
line 340, in setup (self._help_xinfo(), str(e)) RuntimeError:
-xinfo example.xinfo (START_END start end, not "START_END")"
#CCP4I TERMINATION TIME 23 Sep 2015 12:26:25
#CCP4I TERMINATION OUTPUT_FILES /home/ric/p422/xia2_27
#CCP4I MESSAGE Task failed
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