Hi,
Following up on this question:
If one did want to find out the average z-stat equivalent for the significant clusters for each individual, would it be feasible to use
fslstats filtered_func_data.nii.gz -k <significant mask area> -M?
I have tried fslstats thresh_zstat.nii.gz (from 1st level FEAT) -k <significant mask (from 2nd level FEAT)> -M
but the two images often don't overlap and give errors.
Thanks a lot,
Shayanti
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