On Saturday, 27 June 2015 04:39:56 PM Clarke, Oliver wrote:
> I would still ultimately favor making it a standard residue with three letter code UNK and single letter code X - it allows for easy specification of ambiguity, and it is the PDB-sanctioned way of representing an amino acid of unknown identity.
>
> I would also suggest being able to set this as the default type for new residues - it allows easy recognition of amino acids that are as yet unassigned, and avoids confusion with alanine.
I like that idea a lot.
Ethan
>
> Cheers,
> Oliver.
--
mail: Biomolecular Structure Center, K-428 Health Sciences Bldg
MS 357742, University of Washington, Seattle 98195-7742
|