Hello Dear Andersson and other FSL experts,
First of all sorry to bother you again.
But I tried the fslroi as per suggested but I'm still getting following error
[fsl@fslvm6 top]$ fslroi blip_up b0_blip_up 0 1
[fsl@fslvm6 top]$ fslroi blip_down b0_blip_down 0 1
[fsl@fslvm6 top]$ fsl -t both_b0 b0_blip_up b0_blip_down
[fsl@fslvm6 top]$ fsl -t both_b0 b0_blip_up b0_blip_down
[fsl@fslvm6 top]$ fslmerge -t both_b0 b0_blip_up b0_blip_down
WARNING:: Inconsistent orientations for individual images when attempting to merge.
Merge will use voxel-based orientation which is probably incorrect - *PLEASE CHECK*!
[fsl@fslvm6 top]$
Any suggestion will greatly apprecaited.
Thanks
manoj
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