Dear FSL experts,
I am trying to run FSL FOX on HCP data and after much editing to the settings.sh script I am getting the following error:
rmbp:~ Sampada$ cd /Volumes/HCP_Data/fix1.06/
rmbp:fix1.06 Sampada$ /Volumes/HCP_Data/fix1.06/hcp_fix /Volumes/HCP_Data/fMRI_Resting/LS2043/MNINonLinear/Results/rfMRI_REST1_RL/rfMRI_REST1_RL.nii.gz 2000
processing FMRI file rfMRI_REST1_RL with highpass 2000
running highpass
running MELODIC
running FIX
FIX Feature extraction for Melodic output directory: rfMRI_REST1_RL_hp2000.ica
create edge masks
run FAST
registration of standard space masks
extract features
FIX Classifying components in Melodic directory: rfMRI_REST1_RL_hp2000.ica using training file: /Volumes/HCP_Data/fix1.06/training_files/HCP_hp2000.RData and threshold 10
FIX features not already generated, so creating them now.
FIX Feature extraction for Melodic output directory: rfMRI_REST1_RL_hp2000.ica
create edge masks
run FAST
registration of standard space masks
extract features
No valid labelling file specified
Will you please let me know how do I fix this error message to get the script going again?
Thanks and regards,
Sampada
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