Hello FSL Experts,
I am interested in using the B0 correction built into FEAT, and I wanted
to check that I am preprocessing the fieldmap images correctly.
I have applied BET to the magnitude image (*grefieldmapping1001.nii.gz)
and I am planning to use fsl_prepare_fieldmap for processing the phase
image (*grefieldmapping2002.nii.gz).
Would you mind checking the command below that I intend to run?
fsl_prepare_fieldmap SIEMENS ${PhaseImage} ${MagnitudeImage}_brain.nii.gz
${OutputImage} 2.46
# DeltaTE (2.46) = ET2(7.65) - ET1 (5.19)
Thank you for the help,
Jacob
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