Hello Dr Wayne,
Many thanks for your prompt reply. I am now able to draw up to 20
multidimensional marks.
I feel that 20 is reasonable upper bound for number of marks. For example, when
I am looking at the residue Lysine, I need 5 marks to highlight all the carbons
(C-alpha to C-epsilon say in Ccc(co)NH spectrum ) and about 8 to 10 marks to
highlight all the protons (in Hcc(co)NH spectrum). That makes it 13 to 15 marks.
( The intersection of these marks will give me the location of proton-carbon
correlations in 1H,13C-HSQC spectrum.)
So, I feel that you could probably make the default value for maximum number of
marks to be 20 (and let it go as high as 30 using the command line assignment
for "top.analysisProject.maxMarks" when one really needs).
with regards,
Aswani
> Hello,
>
> On the Python command line (so in the shell where you start Analysis up) you can
> type the following to get up to (say) 20 marks:
>
> top.analysisProject.maxMarks = 20
>
> If you open up the Window: Marks and Rulers dialog it might trample it back down
> to 10, but if so just use the above again.
>
> What is a reasonable upper bound on the number of marks?? I could change the 10
> in the code easily enough (rather than you having to always type the above every
> time you start up Analysis).
>
> Wayne
>
> On 24 Feb 2015, at 14:52, Aswani Kumar wrote:
>
>> Hello Analysis Developers/Users,
>>
>> I have been trying to assign proton side-chains and subsequently 13C and 15N
>> edited NOESY ( I am using a set of Hcc(co)NH, HccH-TOCSY, TOCSY-15N-HSQC,
>> NOESY-15N-HSQC, Ccc(co)NH and so on).
>>
>> While trying to assign residues having long side-chains (such as Lys, Arg and
>> Met), I find that the maximum number of marks (which is currently 10) is not
>> sufficient. As I mark more than 10 peaks, the oldest ones keep disappearing.
>>
>> Though it is not severely limiting, I prefer to see the full ladder with all
>> the cross peaks marked. Is it possible to increase the maximum number of
>> marks? or is there any way out? or am I missing something?
>>
>> thanking you in advance,
>>
>> with regards,
>> Aswani
>>
>> --
>> K.Aswani Kumar, PhD Student,
>> Molecular Biophysics Unit,
>> Indian Institute of Science,
>> Bangalore-560012, India.
>
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