Hi Chuck
Do you have SGE_ROOT set correctly? Do you have short.q etc available on your SGE?
Kind Regards
Matthew
> Hi Matthew,
>
> Correct, this is not happening. In looking at the fsl_sub installed from the source, I find no reference to the FSLPARALLEL variable.
>
> Best,
> Chuck
>
>
> On 01/13/2015 06:04 AM, Matthew Webster wrote:
>> Hello,
>> fsl_sub should be able to submit to SGE by default - is this not happening for you?
>>
>> Kind Regards
>> Matthew
>>
>>> I have downloaded the source tarball of fsl, but have found that fsl_sub diverges from that available via NeuroDebian, in particular it does not account for FSLPARALLEL. Is there a source download that is grid-enabled?
>
>
> --
> Chuck Theobald
> System Administrator
> The Robert and Beverly Lewis Center for Neuroimaging
> University of Oregon
> P: 541-346-0343
> F: 541-346-0345
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