Dear SPM experts,
I am having a bizarre issue during normalization of fMRI scans to the EPI template in SPM8 where they are outputted as physically shifted up on the z- and y-axes for some reason after the normalisation. When SPM outputs the results of the normalisation, it looks fine, and properly matched to the template. However, when I check the registration of the images against the template, they are shifted in space. So, I am not sure why it is shifted in space like this, and it has only happened with some of the brains in my sample. Any help or suggestions is much appreciated.
Best,
Mike Sugarman
Wayne State University
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