Yes, your mask needs to be in the same space as your input image. Take a look at the documentation and course material for FLIRT.
Cheers,
David
On Dec 29, 2014, at 12:45 PM, Archana Malagi <[log in to unmask]> wrote:
> Hi David,
>
> Thanks for the response.
> Input_img must be segmented white matter image!
> If i use this image, it is returning error ´Mask and image must be the
> same size´.
>
> Thank you,
>
> Regards,
> Archana
>
>
> # Hi Archana,
> #
> # Try the -V and -k options in fslstats:
> # fslstats input_img -k mask_img -V
> #
> # Cheers,
> # David
> #
> #
> # On Dec 29, 2014, at 12:06 PM, Archana Malagi <[log in to unmask]> wrote:
> #
> #> Hi FSL Experts,
> #>
> #> I want to calculate white matter tract volume, how can i calculate tract
> #> volume using fslstats with mask?
> #>
> #>
> #> Thanks,
> #>
> #>
> #> Regards,
> #> Archana Malagi
> #
> #
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