What is the exact error you are getting?
Also, does your template_list contain a line with the text
"template_list"? If so, you should remove it.
The size of your images shouldn't be a problem here.
On Tue, Nov 11, 2014 at 7:24 PM, Swati Rane <[log in to unmask]> wrote:
> Hello,
>
>
> I apologize for the late reply. Following were the steps I used:
>
> 1. Create a template list
> 2. fslvbm_1_bet -b
> 3. fslvbm_2_template -n
>
> I was suggested to run fslreorient2std and try robustfov. I applied these commands and reran the above steps as a fresh analysis. I still get the same error.
>
> The data size is not standard - 172x220x256 (1mm isotropic voxels). Can that cause problems? I dont see excessive neck in the images and bet runs properly.
>
>
> Swati
--
Niels Bergsland
Integration Director
Buffalo Neuroimaging Analysis Center
100 High St. Buffalo NY 14203
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