You could try situs colores, which does fitting of model into map automatically.
Sent from Jack's iPhone
> On Oct 23, 2014, at 12:49 PM, "jie liu" <[log in to unmask]> wrote:
>
> Dear you all
>
> May I ask a question? I tried to dock my protein structure onto an cryo-EM density map. I loaded both the map file and my model coordinates into Chimera. But it looks apparently that they are not in the same size scale. My model is much bigger than the size of the EM map region where the model is supposed to reside. I suspect the EM map size is scaled down somehow.
>
> I did a little research on internet but couldn't find a solution. Could you please advice me how to put them to the same size scale?
>
> Your kind help is greatly appreciated!
>
> Jie
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