Dear Remie,
did you check (with a text editor) the PDB file saved from coot if it actually
reordered the chains inside the file? Maybe chain C is still listed first, and
maybe this is what pymol takes as order.
Regards,
Tim
On Thu, Aug 07, 2014 at 11:19:42AM -0400, Remie Fawaz-Touma wrote:
> Hi everyone,
>
> Does anyone know how to rearrange chains when looking at a structure in PyMol (maybe it has to be done in coot, don?t know).
>
> I have the ligand first now in PyMol and would like to see the sequence of the protein first, then ligand.
>
> It is worth mentioning that I did reorder the chains in coot: Extensions > Modelling > Reorder chains, and chain A is my protein, B is the ligand and C are the waters.
>
> So why don?t I see the same order in PyMol and how do I fix that?
>
> Thanks for any help,
>
> Remie
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Dr Tim Gruene
Institut fuer anorganische Chemie
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