If you use FIVE (http://mrtools.mgh.harvard.edu/index.php/Downloads),
then you can set the min/max values to displayed as well as adjust the
color. That is the only way I know to make specific isolated ranges
inside a program. Then you can combine them using graphic software
like Adobe Photoshop.
If you have a specific range (e.g. 0.5 to 4.5), then you can choose a
colormap that splits it into X colors. This would produce a single map
of multiple colors corresponding to different intensity bins.
Other options would be to make 4 separate maps - with different
colormaps - and combine them in a program like Adobe Photoshop.
Best Regards, Donald McLaren
=================
D.G. McLaren, Ph.D.
Research Fellow, Department of Neurology, Massachusetts General Hospital and
Harvard Medical School
Postdoctoral Research Fellow, GRECC, Bedford VA
Website: http://www.martinos.org/~mclaren
Office: (773) 406-2464
=====================
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On Mon, Jul 28, 2014 at 3:05 AM, Andy Yeung <[log in to unmask]> wrote:
> Dear all,
>
> Thanks for all your help. I'd like to show maps from the lower panel.
> That's overlapping t maps with different p thresholds all into a single map
> with different color codings.
> Is there a way to do so?
>
> Best,
> Andy
>
>
> On Mon, Jul 28, 2014 at 9:53 AM, MCLAREN, Donald <[log in to unmask]>
> wrote:
>>
>> You can set the thresholds to whatever you would like in the SPM
>> Results window. This will give you different maps similar to what you
>> attached to your email. You might also want to look at the program
>> FIVE by Aaron Schultz.
>> Best Regards, Donald McLaren
>> =================
>> D.G. McLaren, Ph.D.
>> Research Fellow, Department of Neurology, Massachusetts General Hospital
>> and
>> Harvard Medical School
>> Postdoctoral Research Fellow, GRECC, Bedford VA
>> Website: http://www.martinos.org/~mclaren
>> Office: (773) 406-2464
>> =====================
>> This e-mail contains CONFIDENTIAL INFORMATION which may contain PROTECTED
>> HEALTHCARE INFORMATION and may also be LEGALLY PRIVILEGED and which is
>> intended only for the use of the individual or entity named above. If the
>> reader of the e-mail is not the intended recipient or the employee or
>> agent
>> responsible for delivering it to the intended recipient, you are hereby
>> notified that you are in possession of confidential and privileged
>> information. Any unauthorized use, disclosure, copying or the taking of
>> any
>> action in reliance on the contents of this information is strictly
>> prohibited and may be unlawful. If you have received this e-mail
>> unintentionally, please immediately notify the sender via telephone at
>> (773)
>> 406-2464 or email.
>>
>>
>> On Thu, Jul 24, 2014 at 11:14 PM, Andy Yeung <[log in to unmask]>
>> wrote:
>> > Dear all,
>> >
>> > I'd like to create maps like the attached one to show even unthresholded
>> > or
>> > subthresholded activities. Is there a convenient way to achieve this?
>> > Thanks
>> > for the help.
>> >
>> > Best,
>> > Andy
>
>
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