On 5 Jun 2014, at 11:07, Robert Bromley <[log in to unmask]> wrote:
> Hi Duncan,
>
> Thanks a lot for getting back to me about this. I managed to get the script running, although, I used Wifi instead of Ethernet, downloaded the newest installer and used the -D switch, so I'm not sure which bit made it work.
>
I wonder if there is some restriction in place on your ethernet network.
> Unfortunately, I'm still having problems. The script ran as below and I can see fslview in Applications but when I click on it I just get a dialogue box which says The alias “fslview” can’t be opened because the original item can’t be found. The button options are to delete or fix the alias. I don’t suppose you’ve got any idea of what I can try next?
>
Check that the fslview alias points at the correct location:
ls -l /Applications/fslview.app
this should report /usr/local/fsl/bin/fslview.app. If not:
sudo rm /Applications/fslview.app
sudo ln -s /usr/local/fsl/bin/fslview.app /Applications/
and try again.
Duncan
> Thanks
> Rob
>
> Last login: Thu Jun 5 09:47:17 on console campus-10-41-252-244:~ root# cd ~/Downloads campus-10-41-252-244:Downloads root# python fslinstaller.py
> --- FSL Installer - Version 2.0.14 ---
> [OK] Installer is current
> Where would you like to install FSL? [/usr/local]: FSL Install location doesn't exist, should I create it? [yes]: Yes Downloading FSL version 5.0.6 (this may take some time)
> Checking download...
> [OK] Download is good.
> Installing FSL software...
> [OK] FSL software installed.
> Creating Application links...
> Checking for X11 windowing system (required for FSL GUIs).
> [OK] X11 software (required for FSL GUIs) is installed.
> campus-10-41-252-244:Downloads root#
>
>
> -----Original Message-----
> From: FSL - FMRIB's Software Library [mailto:[log in to unmask]] On Behalf Of Duncan Mortimer
> Sent: 03 June 2014 13:41
> To: [log in to unmask]
> Subject: Re: [FSL] Problem installing FSL
>
> Hi,
>
> Could you try re-downloading the installer, there was a bug in the error reporting on older versions of Python (as available on OS X) - there has been an issue with determining the download settings but the bug is preventing the error message from being displayed. This has been fixed in version 2.0.14.
>
> Once you have this try running it with the ‘-D’ option and we’ll see if there is any useful information as to why you are getting a download failure.
>
> Duncan
> On 29 May 2014, at 14:05, Rob Bromley <[log in to unmask]> wrote:
>
> > Hi everyone,
> >
> > I’m having a bit of trouble installing FSL and I’m hoping someone might be able to help!
> >
> > I’ve downloaded fslinstaller.py for OSX and followed the instructions to run it from the Downloads directory with the commands:
> >
> > cd ~/Downloads
> >
> > python fslinstaller.py
> >
> > When I do though, I’m just getting the following error:
> >
> > Last login: Thu May 29 11:27:54 on console psc-pc120:~ root# cd
> > ~/Downloads psc-pc120:Downloads root# python fslinstaller.py
> > --- FSL Installer - Version 2.0.13 --- Traceback (most recent call
> > last):
> > File "fslinstaller.py", line 1975, in <module>
> > installer(options,args)
> > File "fslinstaller.py", line 1720, in installer
> > a_result = fastest_mirror()
> > File "fslinstaller.py", line 901, in fastest_mirror
> > MsgUser.debug(e.reason.strerror)
> > AttributeError: 'error' object has no attribute 'strerror'
> > psc-pc120:Downloads root#
> >
> > I’m running OSX 10.6 with the most recent updates and I’ve tried logging in as the root user.
> >
> > Any ideas?
> >
> > Thanks
> >
> > Rob
>
> --
> Duncan A B Mortimer DPhil MChem
> Computing Officer, FMRIB Centre, University of Oxford,
> John Radcliffe Hospital, Headington, Oxford OX3 9DU, UK.
> Tel: (0)1865 222713 email: [log in to unmask]
> Personal email (not for IT support): [log in to unmask]
--
Duncan A B Mortimer DPhil MChem
Computing Officer, FMRIB Centre, University of Oxford,
John Radcliffe Hospital, Headington, Oxford OX3 9DU, UK.
Tel: (0)1865 222713 email: [log in to unmask]
Personal email (not for IT support): [log in to unmask]
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