FSL group,
Re the use of fdr with randomize, I fed the string below into fdr and the probability threshold below resulted.
-How is this number to be “applied” to the p-value image?
-Also, the thresholded FDR image created seems much less stringent than the permuted corrp_stat image when thresholded in fslview.
fdr -i LgRD9_tfce_p_tstat1.nii.gz --oneminusp -m mean_FA_symmetrised_skeleton_mask.nii.gz -q 0.10 --othresh=thresh_LgRDanfdrstat1
Probability Threshold is:
0.0078125
Thank you
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