Dear FSL experts ,
I am following the user guide provided on FSL-VBM page , and confused with some questions:
1. template_list
a) Must I use the following command to create template_list?
for g in CON_2304.nii.gz CON_2878.nii.gz CON_3456.nii.gz CON_4133.nii.gz CON_4690.nii.gz PAT_2042.nii.gz \
PAT_2632.nii.gz PAT_3193.nii.gz PAT_4134.nii.gz PAT_6659.nii.gz; do
echo $g >> template_list
done
I have 45 subjects ,and it is not convenient for entering them .
b) Could I directly create a file named “template_list” including all filename of template subjects ?
2. fslvbm_2_template
Could you tell me how to choose the parameter –a or –n ?
3. smooth
How to select the most appropriate size of smoothing kernel ?
Bests .
Shi Xin-Fa
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