Hi Mihaela,
the command to obtain the dendrogram is nets_hierarchy
For more details about nets_edgepics, nets_hierarchy, and other commands, see:
http://fsl.fmrib.ox.ac.uk/fslcourse/lectures/practicals/rfMRIconnectivity/index.html
Best,
Ludovica
---
Dr Ludovica Griffanti, PhD
Analysis Postdoctoral Research Assistant
Oxford Centre for Functional MRI of the Brain (FMRIB)
Nuffield Department of Clinical Neurosciences, University of Oxford
John Radcliffe Hospital
Oxford, OX3 9DU, UK
email: [log in to unmask]
On 27 Jun 2014, at 05:59, Mihaela Onu <[log in to unmask]> wrote:
> Hello everyone,
> I start using FSLNets trying to make a two-group analysis. My question is how the nets_edgepics command output should look like? I am getting something like in the figure attached however, I think that I should get a dendrogram representation (is actually a recent paper I saw using FSLNets (Altered resting-state connectivity in Huntington's Disease, Werner CJ, 2014) where the correlation coefficients between the time-series of all ICAs were represented as dendrogram).
> Thank you a lot for your opinion,
> Mihaela
> <Screenshot from 2014-06-27 00:22:40.png>
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