Dear all,
I've used probtrackx2 to perform tractography using a bilateral thalami mask as identified from the Harvard-Oxford subcortical atlas. I would really appreciate your input on how to get a 3D volume for each thalami seed voxel, representative of the spatial connection probability of that seed voxel. The idea is to merge those 3D volumes into two 4D volumes per subject (left/right Thal), that will be fed into tICA.
Any help will be greatly appreciated.
Thank you.
BW,
RD
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