Hi all,
I would like to run a TBSS analysis with an ROI which I want to create using the structures in the atlass tool.
My ROI should be the Right and Left Anterior Talamic Radiation, I'm able to save the R_ATR and L_ATR as two different mask and to binarize them but when I try to merge the two mask in order to create one ROI comprensive of both tracts i get as a result only the L_ATR
I'm using this command to merge the masks:
fslmerge -a ATR_BIL ATR_L.nii.gz ATR_R.nii.gz
I cecked if by misttake I saved two times the Left anteror talamic radiation giving to one of them the name R_ATR but it is not the case, do you have any idea were I'm making mistake?
Also I would like to ask you if it is different to run 2 analysis one with the L_ATR and another with R_ATR or alternatively one analysis with a ROI which include L_ATR and R_ATR.
Thanks for the suggestions
best,
Mauro
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