For the results part, I have met the same problem, I ran fix on my own
preprocessed data, and got output as below:
FIX Feature extraction for Melodic output directory:
sub392/analysis/test_pre.feat
create edge masks
run FAST
registration of standard space masks
extract features
FIX Classifying components in Melodic directory:
sub392/analysis/test_pre.feat using training file:
/opt/fmritools/fsl-fix/training_files/Standard.RData and threshold 20
No valid labelling file specified
Help please:)
On Fri, Jan 17, 2014 at 9:41 AM, SUBSCRIBE FSL B. Jeong
<[log in to unmask]> wrote:
> Hi Duncan Mortimer,
>
> I can not find 'CIFTIMatlabReaderWriter' files in my workbench directory (redhat6 64bit).
> Even if I changed the path in fix_3_clean.m, 'filtered_func_data_clean.nii.gz' was not created.
>
> Do you have ''CIFTIMatlabReaderWriter' files in your workbench directory?
>
> Thanks,
>
> Jeong
>
>
>> fix test+.feat /APP/HPC/NeuroscienceSoftware/fix1.05/training_files/Standard.RData 20 -m
> FIX Feature extraction for Melodic output directory: test+.feat
> create edge masks
> run FAST
> registration of standard space masks
> extract features
> FIX Classifying components in Melodic directory: test+.feat using training file: /APP/HPC/NeuroscienceSoftware/fix1.05/training_files/Standard.RData and threshold 20
> No valid labelling file specified
--
Best Regards
Xue, Feng Ph.D.
Psychology Department
University of Southern California
Los Angeles CA, 90089
Mobile: +1 213-249-1040
==============================================
National Key Laboratory of Cognitive Neuroscience and Learning
Beijing Normal University
Beijing, China. 100875
Mobile: +86 13810154455
web: http://psychbrain.bnu.edu.cn
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