Hi again
Further to my email yesterday re the Asl_gui, I then found the previous message (apologies for missing this before) and have had our FSL version updated to 5.0.6. This has solved the original problem.
Now the script runs, but I get 'FATAL ERROR ENCOUNTERED'. I have scoured the error log file and the following summary of warnings and errors are given:
Summary of warnings (2 distinct warnings)
Issued 60 times: Cache is disabled to avoid memory problems!
Issued once: Not saving finalSpatialPriors.nii.gz -- too huge!!
then further down:
Calculating variance for: T_1
FABBER: MVNtool
Option doesn't begin with --: 4
An exception has been thrown
Runtime error:- An option doesn't begin with --
Is this error due to the figured and options I've selected? I would be really grateful for some advice.
thanks
Ella
Previous message:
Hi
I am attempting to use the Asl GUI for the first time. I've read the user guide and thought I had inputted the correct figures/images etc. but I keep getting the following error when I click 'Go'. I would be really grateful if anyone could shed any light on what's causing this error, and more importantly what I can do to correct it!
With thanks in advance
Ella Hinton
ERROR message:
missing )
missing )
("if" test expression)
while compiling
"if { $Asl(doCalibration } {
set aslCalibCommand "$FSLDIR/bin/asl_calib -i $Asl(outputdir)/native_space/perfusion --tissref $Asl(tissueType) --t1r $As..."
(compiling body of proc "aslLaunch", line 89)
invoked from within
"aslLaunch"
invoked from within
".rename.execute invoke"
("uplevel" body line 1)
invoked from within
"uplevel #0 [list $w invoke]"
(procedure "tk::ButtonUp" line 22)
invoked from within
"tk::ButtonUp .rename.execute"
(command bound to event)
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