Hi Thomas,
maybe you can try to use AMBER programs. http://ambermd.org/
I think these programs allow you to use different forcefield to minimise the energy of your model.
Hope to Help
Nicolas
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De : CCP4 bulletin board [[log in to unmask]] de la part de Thomas RORET [[log in to unmask]]
Envoyé : jeudi 16 janvier 2014 15:32
À : [log in to unmask]
Objet : [ccp4bb] Docking model
Hi,
I made one docking model of a protein complex by NMR and another one by
modeling.
I wanted to knowwhich software to useto minimize the energy (close
contacts, H bonds, ...)
best regards,
Thomas.
--
Thomas RORET
BioMod Team
Tel. 00 333 83 68 47 89
CRM2 UMR CNRS-UL 7036
Faculté des Sciences et Technologies
BP 70239
54506 Vandoeuvre-les-Nancy
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