Hi
I was trying to open my structures tab so I could write a pdb file in Analysis 2.2.2. Every time I try to open this in my project the program stalls for a couple of minutes and I get the following error in the terminal:
WARNING Error in clean-up of incorrectly created object.
Data may be left in an illegal state
Error loading file for: <ccp.molecule.MolStructure.StructureEnsemble [<ccp.molecule.MolSystem.MolSystem ['MS1']>, 23]>
Reading: <open file '/home/Stephanie/Desktop/SRA_const2/srapC2_ambigassign2/ccp/molecule/MolStructure/_ccp_molecule_MolSystem_MolSystem___MS1___+23+srapC2_ambigassign2_Stephanie_2013-10-04-10-06-05-388_00001.xml', mode 'r' at 0x1ab78f98>
Last xml tag read: None
Parser state was: reading
Current object was: <ccp.molecule.MolStructure.Atom [<ccp.molecule.MolSystem.MolSystem ['MS1']>, 23, 'A', 72, 'HB2']>
Exception in Tkinter callback
Traceback (most recent call last):
File "/home/Stephanie/ccpnmr/python2.6/lib/python2.6/lib-tk/Tkinter.py", line 1410, in __call__
return self.func(*args)
File "/home/Stephanie/ccpnmr/python2.6/lib/python2.6/lib-tk/Tkinter.py", line 495, in callit
func(*args)
File "/home/Stephanie/ccpnmr/ccpnmr2.2/python/ccpnmr/analysis/popups/EditStructures.py", line 1243, in update
codes = [c.code for c in structure.coordChains]
File "/home/Stephanie/ccpnmr/ccpnmr2.2/python/ccp/api/molecule/MolStructure.py", line 10032, in getCoordChains
Automated report failed
Has anyone else had this problem and do you know how to fix it.
Thanks,
Stephanie Bilinovich
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