Out of 42 T1 datasets processed with New Segment (SPM8, default options), 36 provided great segmentations and 6 resulted in Epic Fail.
Why Fail? Segmentations were not correct.
Why Epic? Tissues classes covered most regions OUTSIDE the brain/skull (and almost excluded brain/skull altogether)
Help? This is particularly "interesting" that the tissue maps are all in the background (i.e. in regions with intensity close to 0) so hopefully an easy fix exists. Any help would be greatly appreciated.
An example of T1 image for which the segmentation goes bad can be found there: https://www.dropbox.com/s/9zc5xvktxvqq8sp/T1.nii
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