Hi.
I am using CcpNmr Analays 2.2.2. on Fedora 18.
I tried to do data analysis using 'Follow Intensity Changes" option.
When I clicked the "Group& Fit Peaks" button, calculating was started. But when the status bar reached 9%, it was stopped.
I was wating and I did another Project when I opened.
30mins later, I checked the status. It still 9% and seemed to be program down.
So I closed another project. and I shut down the computer and restarted.
After rebooting, I can't open both projects.
I can open other projects but only two project which I was analying last night can't open just showing "Project Invalid, please quit, fix and re-start: SyntaxError:no element found: line 9, column 21"
"Model read finished. Duration 0.515616178513
Model validity check skipped
CcpNmr Analysis Version 2.2. Release 2 (Copyright 2003-2010 CCPN)
Distribution created Tue Mar 13 16:28:53 2012
If you use CcpNmr Analysis, please quote the following reference:
Wim F. Vranken, Wayne Boucher, Tim J. Stevens, Rasmus H. Fogh, Anne
Pajon, Miguel Llinas, Eldon L. Ulrich, John L. Markley, John Ionides
and Ernest D. Laue (2005). The CCPN Data Model for NMR Spectroscopy:
Development of a Software Pipeline. Proteins 59, 687 - 696.
A copy of the in-program documentation is located at:
http://www.ccpn.ac.uk/documentation/
For how-tos and FAQs visit the CCPN wiki site at:
http://www.ccpn.ac.uk/wiki/
To report bugs use the bug tracker at:
http://www.ccpn.ac.uk/bugs/
For help and support join the mailing list at:
http://www.ccpn.ac.uk/support/
For Python API documentation, tutorials and CCPN web applications visit:
http://www.ccpn.ac.uk/
Error loading file for: <ccpnmr.Analysis.AnalysisProject ['defaultProject']>
Reading: <open file '/home/zino/ccpnmr/20131007_R12_RNA_titration/ccpnmr/Analysis/defaultProject+defaultProject_zino_2013-10-07-14-01-32-328_00001.xml', mode 'r' at 0x5f426f0>
Last xml tag read: None
Parser state was: reading
Current object was: []
Traceback (most recent call last):
File "/usr/local/ccpnmr/ccpnmr2.2/python/ccpnmr/analysis/AnalysisGui.py", line 226, in <module>
main(projectDir, max_size, glDirect)
File "/usr/local/ccpnmr/ccpnmr2.2/python/ccpnmr/analysis/AnalysisGui.py", line 111, in main
top.initProject(project)
File "/usr/local/ccpnmr/ccpnmr2.2/python/ccpnmr/analysis/AnalysisPopup.py", line 1590, in initProject
Analysis.initProject(self, project)
File "/usr/local/ccpnmr/ccpnmr2.2/python/ccpnmr/analysis/Analysis.py", line 291, in initProject
self.initTopObjects(project)
File "/usr/local/ccpnmr/ccpnmr2.2/python/ccpnmr/analysis/Analysis.py", line 261, in initTopObjects
self.analysisProject.isThreadingAllowed = False
File "/usr/local/ccpnmr/ccpnmr2.2/python/ccpnmr/api/Analysis.py", line 10346, in setIsThreadingAllowed
self.load()
File "/usr/local/ccpnmr/ccpnmr2.2/python/memops/api/Implementation.py", line 25419, in load
self.loadFrom(repositories[0])
File "/usr/local/ccpnmr/ccpnmr2.2/python/memops/api/Implementation.py", line 25453, in loadFrom
XmlIO.loadTopObject(repository.url.getDataLocation(), self)
File "/usr/local/ccpnmr/ccpnmr2.2/python/memops/format/xml/XmlIO.py", line 236, in loadTopObject
return loadFromStream(open(filePath), topObjId=topObjId, topObject=topObject)
File "/usr/local/ccpnmr/ccpnmr2.2/python/memops/format/xml/XmlIO.py", line 267, in loadFromStream
partialLoad=partialLoad)
File "/usr/local/ccpnmr/ccpnmr2.2/python/memops/xml/Implementation.py", line 4514, in loadFromStream
for event, elem in ElementTree.iterparse(stream, events=("start", "end")):
File "<string>", line 68, in __iter__
SyntaxError: no element found: line 9, column 21"
please let me know how to fix it or recover it.
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