Hello, I followed the instructions on the following link to install FSL on my Mac running 10.8.5:
http://fsl.fmrib.ox.ac.uk/fsl/fslwiki/FslInstallation/MacOsX
I am the administrator. After "cd ~/Downloads", I did a "sudo python fslinstaller.py". My problem is in the "Checking the installation" step. I rebooted the computer and opened a new xterm. When I typed "echo $FSLDIR", I got: y/fsl in return. How come? During the installation, I just pressed the Return key to select the default install folder /usr/local.
Another issue is that when I typed: "flirt -version", I got: bash: flirt: command not found
Typing fsl also leads to: bash: fsl: command not found
When I typed "cd /usr/local", I found the fsl folder. When I went to: /usr/local/fsl/bin and typed ./fsl, I got:
"You need to set the FSLDIR environment variable to point to the FSL installation directory before you can run anything."
In the same folder, when I typed: ./flirt -version, I got: FLIRT version 6.0
Could anybody please help? Thank you.
|