Hello Anders,
Can you upload the MELODIC output directory and input files ( they will be listed in the .filelist file in the gica output directory ).
Kind Regards
Matthew
> Hi Stephen,
>
> I just installed the latest patch - and got the same error unfortunately.
>
> The eigenspectrum looks ok and the ICmaps file actually contains 23
> ICs (which is a bit low IMO but ok I guess).
> For some reason something goes wrong when the script tries to create
> the report pages for each IC.
>
> Best,
> Anders
>
> 2013/9/10 Stephen Smith <[log in to unmask]>:
>> HI - have you installed the latest FSL patch release?
>> Cheers.
>>
>>
>>
>> On 9 Sep 2013, at 16:52, Anders Hougaard <[log in to unmask]> wrote:
>>
>> Dear experts,
>>
>> I still struggle with this strange problem.
>> I tried running Melodic from the command line and found out that it
>> fails while creating the reports for each IC.
>> This is what I've found out so far:
>>
>> - The script stops with the error message: "Segmentation fault: 11"
>> - The last generated file is "t1.png". This file is empty.
>>
>> I check all input fmri data using fslinfo. They have the same
>> dimension sizes. The registration summary looks fine.
>> Any ideas?
>>
>> All the best,
>> Anders
>>
>>
>> 2013/9/5 Anders Hougaard <[log in to unmask]>:
>>
>> Dear all,
>>
>>
>> I just ran Melodic using temporal concatenation and automatic
>> dimensionality estimation on a group of 84 subjects.
>> This procedure usually produces an output of 50+ ICs but in this case
>> there was only one. I could not see any error messages in the log.
>> What could be going wrong?
>>
>> All the best,
>> Anders
>>
>>
>>
>>
>> ---------------------------------------------------------------------------
>> Stephen M. Smith, Professor of Biomedical Engineering
>> Associate Director, Oxford University FMRIB Centre
>>
>> FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK
>> +44 (0) 1865 222726 (fax 222717)
>> [log in to unmask] http://www.fmrib.ox.ac.uk/~steve
>> ---------------------------------------------------------------------------
>>
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>
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