Dear FSLexperts,
I have a problem about the HavardOxford-Subcortical.xlm. I found the index in this file was not consistent with the intensity in the $FSLDIR/data/atlases/HavardOxford/HavardOxford-Sub-maxprob-thr25-1mm.nii.gz. For example, for
label 'index="0", x="58", y="37", z="50" which indicates left Cerebral White Matter, the intensity of the same voxel coordinates in HavardOxford-Sub-maxprob-thr25-1mm.nii.gz is "1". It seems that the intensities are always 1 bigger than the label indice.
Is there something wrong with the HavardOxford-Subcortical.xlm, or I misunderstood something?
Thanks for the comment.
Best,
Qin
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