> Date: Thu, 25 Jul 2013 20:37:51 +0500
> From: [log in to unmask]
> Subject: [FSL] help regarding my tbss results
> To: [log in to unmask]
>
> Dear All,
> Hi,
> I need some urgent help regarding my tbss results. I am working on 3 patients and 3 control group data for my masters thesis. I know that population is so less but still i want to run tbss. I performed statistics on the data using randomise. I can see the difference in 2 groups after initial analysis when i use command
> fslview $FSLDIR/data/standard/MNI152_T1_1mm mean_FA_skeleton -l Green -b 0.2,0.8 tbss_tstat1 -l Red-Yellow -b 3,6 tbss_tstat2 -l Blue-Lightblue -b 3,6
>
> But when i try to display my results by using the following command all the red areas disappear and only green skeleton is visible
> fslview mean_FA -b 0,0.6 mean_FA_skeleton -l Green -b 0.2,0.7 tbss_fill -l Red-Yellow
>
>
> Why is it so? can you please help me in this problem.
>
> Also guide how can i further extract the FA values from my tbss results?
> Thanks a lot
>
> Regards,
> Nida
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