Hi - most likely the input data/header is corrupt then - what us your full command? What do you get from
fslinfo headimage
fslstats headimage -r -R
Steve
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Stephen M. Smith, Professor of Biomedical Engineering
Associate Director, Oxford University FMRIB Centre
FMRIB, JR Hospital, Headington,
Oxford. OX3 9 DU, UK
+44 (0) 1865 222726 (fax 222717)
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http://www.fmrib.ox.ac.uk/~steve
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On 18 Jun 2013, at 03:47, Tucker Netherton <[log in to unmask]> wrote:
> Hi Steve,
>
> It is crashing with no output written to file.
> I am getting this in my terminal after I execute the command:
>
> /usr/local/fsl/bin/bet: line 392: 5035 Segmentation fault ${FSLDIR}/bin/bet2 $IN $OUT $bet2opts
>
> Thank you,
> Tucker
>
>
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