OOPS - So sorry - sent post to wrong list!
On Mon, 4 Feb 2013, Andreas Bartsch wrote:
> Hi,
>
> this sounds like a question for the FreeSurfer but not the FSL list.
> Cheers,
> Andreas
>
> Am 04.02.13 20:47 schrieb "Susan Alice McLaughlin" unter
> <[log in to unmask]>:
>
>> Hi,
>>
>> I am looking at functional group surface data analyzed with mri_glmfit in
>> tksurfer (using Freesurfer 4.1). I would like to threshold using FDR -
>> but only within a specified label - and then see the resulting functional
>> data map.
>>
>> Once I have the functional dta loaded as an overlay, I have been loading
>> my label and marking the selected label under the Tools menu. I then set
>> the threshold using FDR only on marked data. So far, so good. However,
>> once this is done, I have not been able to see the thresholded functional
>> map in the label; I can only the whole area in white, marked. How do I
>> see my functional data map?
>>
>> I apologize for this simplistic question; I have not been able to find a
>> solution looking through the tksurfer guides online or the mail archives.
>>
>> Thanks,
>>
>> Susan McLaughlin
>> Doctoral Candidate
>> SPACE Lab (Stimulus-Parametric Imaging of Auditory Cortex)
>> Dept. of Speech and Hearing Sciences
>> University of Washington
>
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