Hi,
You can use fslstats to get histogram values, and it can take in a mask with the -k option.
All the best,
Mark
On 17 Feb 2013, at 15:23, Ai Qing <[log in to unmask]> wrote:
> Dear FSL experts,
>
> I know I could get the FA histogram in fslview (tool-image histogram). But I segmented the FA skeleton into different regions using fslmaths (with the binarised mask). Is there a way to get the FA histogram in different regions?
>
> Thanks!
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