Hello,
I wish to prepare one nii file that will contain both the cortical and the subcortical Harvard-Oxford brain atlases.
I saw that in the niis provided with SL , the cortical max probability files have 0 values for voxels that are not assigned any cortical label. However in the subcortical files this is not the case, cortical voxels do have some value.
This makes it difficult for me to merge the matrices.
In the subcortical file, how can you tell if a value is not one of the subcortical regions?
Another question is - where can I get the labels (names of regions) that correspond to the numbers in the atlas files?
Many thanks
Adi
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