Hi Andreas,
not completely sure what the problem is but one thing to look into is
that your spm installation does not seem to be up to date (for spm_spm,
I have 4515 instead of 4191, and for spm_results_ui, I have 4661 instead
of 4209). I would suggest updating your installation and trying again.
One other thing to try if this does not help, did you specify a very low
threshold? There were issues in the past when a huge amount of
supra-threshold activation crashed Matlab. Probably nothing, but maybe
worth a try.
Hope this helps,
Marko
Andreas Kalckert wrote:
> Hi, i have the following problem: when specifying the 2nd level
> analysis, my matlab freezes and doesnt give any result. So, i put in all
> con images and then estimate and then specify the contrast. When going
> through the specifications step by step (Apply masking, title,...) it
> just stops after "threshold" and freezes. I dont get any error message,
> see below. I repeated those steps now several times, it is every time
> the same. I am using matlab 2012a and SPM8. Did anyone experience
> something similar?
> Thanks!
>
>
> Excerpt from Matlab:
>
> ------------------------------------------------------------------------
> Running job #1
> ------------------------------------------------------------------------
> Running 'Factorial design specification'
> Mapping files : ...done
> Design configuration : ...done
> Saving SPM configuration : ...SPM.mat saved
> Design reporting : ...done
> Done
> Done 'Factorial design specification'
> Done
>
>
>
> ------------------------------------------------------------------------
> Running job #2
> ------------------------------------------------------------------------
> Running 'Model estimation'
>
> SPM8: spm_spm (v4191) 11:24:28 - 18/01/2013
> ========================================================================
> Initialising parameters : ...done
> Output images : ...initialised
> Plane 68/68 , block 1/1 : ...done
> Spatial non-sphericity (over scans) : ...done
> Saving results : ...done
> Completed : 11:24:32 - 18/01/2013
> ...use the results section for assessment
>
> Done
> Done 'Model estimation'
> Done
>
>
> SPM8: spm_results_ui (v4209) 11:24:35 - 18/01/2013
> ========================================================================
> contrast image 1 : ...written con_0001.img
> spm{T} image 1 : ...written spmT_0001.img
> SPM computation : ...height threshold>>
>
--
____________________________________________________
PD Dr. med. Marko Wilke
Facharzt für Kinder- und Jugendmedizin
Leiter, Experimentelle Pädiatrische Neurobildgebung
Universitäts-Kinderklinik
Abt. III (Neuropädiatrie)
Marko Wilke, MD, PhD
Pediatrician
Head, Experimental Pediatric Neuroimaging
University Children's Hospital
Dept. III (Pediatric Neurology)
Hoppe-Seyler-Str. 1
D - 72076 Tübingen, Germany
Tel. +49 7071 29-83416
Fax +49 7071 29-5473
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http://www.medizin.uni-tuebingen.de/kinder/epn/
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