Hi,
If you want to do this outside of FSLView, then use atlasquery (see online documentation).
All the best,
Mark
On 25 Jan 2013, at 14:05, SUBSCRIBE FSL Jay <[log in to unmask]> wrote:
> Hello,
>
> I am looking at a voxel with co-ordinates X(116) Y(153) Z(91) in 1mm MNI space using JHU White-Matter Tractography Atlas. The following is what it shows in fslview.
>
> ======================
> JHU White-Matter Tractography Atlas
> 13% Anterior thalamic radiation L, 8% Uncinate fasciculus L, 3% Superior longitudinal fasciculus L, 3% Inferior fronto-occipital fasciculus L, 3% Forceps minor
> ======================
>
> I see that there are different probability values corresponding to 4 different fibers within that perticular voxel. Is there a command option to get the all the 4 probability values for each of the fibers separately for a particular voxel in the MNI co-ordinate system? the purpose is that i would like to mutually exclude Anterior thalamic radiation and Uncinate fasciculus based on these probability values.
>
> Regards
> Jay
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