> Would be a great tool for an image viewer: click somewhere into a
> spatial cluster (not necessarily a stats output) and have it written out
> as a .nii file.
... you mean, you would love to see a "save current cluster" function in
the "save" dropdown field in spm's interactive window when exploring
results? Well, go check, somebody obviously requested that feature before :)
Cheers,
Marko
> > Date: Tue, 27 Nov 2012 11:51:37 -0500
> > Subject: Re: [SPM] Extract clusters from binary mask
> > From: [log in to unmask]
> > To: [log in to unmask]
> > CC: [log in to unmask]
> >
> > My peak_nii toolbox will also provide you with the information you
> > want. I expect to add a few more features in the coming weeks -
> > including the center of binary clusters and probability of a cluster
> > being in a given anatomical region.
> >
> > Best Regards, Donald McLaren
> > =================
> > D.G. McLaren, Ph.D.
> > Research Fellow, Department of Neurology, Massachusetts General
> Hospital and
> > Harvard Medical School
> > Postdoctoral Research Fellow, GRECC, Bedford VA
> > Website: http://www.martinos.org/~mclaren
> > Office: (773) 406-2464
> > =====================
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> >
> > On Tue, Nov 27, 2012 at 6:36 AM, Michel Grothe
> <[log in to unmask]> wrote:
> > > Dear SPMers,
> > >
> > > does anyone know a simple/automatic way to isolate spatially
> separate clusters from a binary mask?
> > > XJview for example allows you to isolate single clusters from
> T-maps, but it doesn't work in my case of a binary mask.
> > > Any hints will be highly appreciated.
> > >
> > > Best,
> > > Michel
--
____________________________________________________
PD Dr. med. Marko Wilke
Facharzt für Kinder- und Jugendmedizin
Leiter, Experimentelle Pädiatrische Neurobildgebung
Universitäts-Kinderklinik
Abt. III (Neuropädiatrie)
Marko Wilke, MD, PhD
Pediatrician
Head, Experimental Pediatric Neuroimaging
University Children's Hospital
Dept. III (Pediatric Neurology)
Hoppe-Seyler-Str. 1
D - 72076 Tübingen, Germany
Tel. +49 7071 29-83416
Fax +49 7071 29-5473
[log in to unmask]
http://www.medizin.uni-tuebingen.de/kinder/epn/
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