On 15/11/2012 13:57, SANCHEZ BARRENA, MARIA JOSE wrote:
> Dear all,
> it seems that none of the tricks from Mark or Tim or Stuart´s ccp4mg
> "making bond" strategy works out... In all cases, the bond is made when
> drawing in "think/fat band" style... However, when representing in
> ribbon style, the link is not there...
> Any other suggestion is welcome! Cheers,
>
> Maria
>
Dear Maria,
Ribbons will fail as you say. This is a case I had never before
considered. A chain is considered to have a start and end and I will
have to think a little how to address this issue. It will take a day or
so to fix this in CCP4MG.
Mark's suggestion would seem to be the only solution at the moment. Make
two copies of your PDB file and move the end residue to the beginning in
one of the copies and renumber the residiue to be first in sequence. The
show both structures, you may get something acceptible.
Best wishes,
Stuart
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