Hello FSL Experts,
We are running into some difficulties thresholding our cluster outputs for a TBSS analyses. We would like see the areas that are statistically significant in an uncorrected contrast of the entire brain at the p=.05 level and the p=.01. When running the syntaxes below, we get outputs with a lot clusters (~350), but the odd thing is that we get more significant clusters using "cluster --in=tbss_tfce_p_tstat2 --thresh=0.99 --o=tbss_tfce_p_tstat2clustertest" that we do for "cluster --in=tbss_tfce_p_tstat2 --thresh=0.95 --o=tbss_tfce_p_tstat2clustertest", which should be less stringent. Unfortunately, I am very new to TBSS syntax so I may be interpreting how to use "cluster" incorrectly.
I would appreciate any help with this.
Thank you,
Ryan
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