Hello,
We are conducting a large cognitive study and are planning to use the TBSS registration tool within FSL. Unfortunately, a limited number of the subject images within the study have ghosting of the eyes in the cerebellum resulting in high intensity regions in the corresponding locations of their FA images. Will the algorithm used within FSL for TBSS registration account for these circumstantial high intensities or would it be beneficial for our team to write a counter process to remove these regions?
Thanks for the help,
Christopher Barth
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