Hello Mark,
To give you a fuller picture, I had run about 40 participants through a script. Each participant has 2 time-points, and I wanted to use the same Fnirt transformation matrix for both time-points. Two participants failed, so I tried the anatomical from the other time point, which also failed. Then I tried the GUI. I just don't understand how this could happen. I now uploaded both participants to 122359.
I really appreciate your help!
-Marina
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