Dear all,
I chose 0 as reference number during eddy_correct.
What is the logic in registering the *tmp0000.nii.gz to the reference volume in this case (they are the same data)? Why isn't it enough to apply only a trilinear interpolation for *tmp0000.nii.gz without registrastion? It would be faster and there is no chance of imperfect registration at all.
Thanks,
Gabor
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