Hi Mark
Basically, i also want to plot some 2D correlation figures from this correlation analysis ( Instead of whole vertices correlation, i want to only focus on investigating the relationship between the displacement distance of statistical significant differences vertices and clinical evaluation), so i want to make sure and realize the step of the vertex based correlation analysis. Are there any commands or scripts in FSL can threshold the group comparison results (like using cluster tool to threshold the 1-p map under corrected P <0.05)? Follow threshold the statistical results from group comparison, could i simply use --savevertices flag with thresholded VTK file to get the coordinate information from these statistical significant vertices ? Finally could i calculate the displacement distance of each vertices (From each vertex coordinates of participants to the normal control mean coordinates or model coordinates which provided in FSL) ?
Thanks !
Paul
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