Hi - Use fslmaths to threshold and binarise the fdt_paths, then load it in fslview on top of a structural, change the image type to "Mask/Label" in fslview, then load 3D mode.
Cheers
Saad
On 14 Jun 2012, at 20:53, Diane Reckziegel wrote:
> Hi,
>
>
> I'm trying to display my probtrackx results as a 3D volume. After opening fdt_paths in FSLView, I open the 3D viewer but nothing appears.
>
> On the other hand, when I try to visualise other images, such as the corresponding MPRAGE or ROI's on the 3D viewer, it does work.
>
> Any ideas of what may be happening?
>
>
> Many thanks,
> Diane
>
--
Saad Jbabdi
University of Oxford, FMRIB Centre
JR Hospital, Headington, OX3 9DU, UK
(+44)1865-222466 (fax 717)
www.fmrib.ox.ac.uk/~saad
|