Hi Claudia,
this is very convenient with PyMOL:
http://pymolwiki.org/index.php/Rms_cur
Cheers,
Thomas
On 06/19/2012 05:04 PM, Claudia Millán Nebot wrote:
> Hello everyone :)
>
> I would like to know if it exist some tool that allows to calculate RMSD
> between 2 pdbs that are identic, but just displaced in space. It should
> not make a superposition, beause if this is the case it will just say
> that RMSD is 0 .
> I know is not such a difficult problem in terms of scripting, but i was
> wondering if there are tools already.
>
> Claudia Millán ([log in to unmask] <mailto:[log in to unmask]>)
>
> Institut de Biologia Molecular de Barcelona (IBMB-CSIC)
>
> Barcelona, Spain
--
Thomas Holder
MPI for Developmental Biology
Spemannstr. 35
D-72076 Tübingen
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