Hi Experts,
i have some problems in reorienting the ROIs that i have created with freesurfer using fslswapdim. I did not have any problems in reorienting the T1 of my subject but when i tried to use the same sequence that i used for the T1 (e.g LR PA IS) the ROIs did never change in the right way. I have tried every possible combination and it did not seem to work, the LPFC for example it was always out of place.
I don't know if i was completely clear but any suggestions would be very appreciated.
Thanks a lot,
Giuseppe
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