Hello Experts,
I ran a very time intensive group temporal concatenation in Melodic, and it did very well, until, I think my computer ran out of disk space just as it was about to go through the PCA step. How can I restart this run without having to repeat the timely preprocessing steps, including the warp to standard with 2mm resampling?
See the final error message of the log below:
Thank you thank you thank you,
Varina
Normalising jointly by voxel-wise variance ... done
Initial data size : 293 x 286456
Reading data file /mnt/hgfs/melodicdesk/NiftiPatientData/A-AVW030912EL-nifti/A-A_Rest_15_3_Warp2std_2mmResample_3mmFWHM.ica/reg_standard/filtered_func_data ... done
Removing mean image ... done
Reading data file /mnt/hgfs/melodicdesk/NiftiPatientData/A-BVW050611-nifti/A-BVW050611_Rest_300_Last_15_3_Warp2std_2mmResample_3mmFWHM.ica/reg_standard/filtered_func_data ... done
Removing mean image ... done
Reading data file /mnt/hgfs/melodicdesk/NiftiPatientData/A-CVW071511-nifti/A-C_Rest_15_3_Warp2std_2mmResample_3mmFWHM.ica/reg_standard/filtered_func_data ... done
Removing mean image ... done
Reading data file /mnt/hgfs/melodicdesk/NiftiPatientData/A-DVW072211-nifti/A-D_Rest_15_3_Warp2std_2mmResample_3mmFWHM.ica/reg_standard/filtered_func_data ... done
Removing mean image ... done
Reading data file /mnt/hgfs/melodicdesk/NiftiPatientData/A-EVW121511-nifti/A-E_Rest_15_3_Warp2std_2mmResample_3mmFWHM.ica/reg_standard/filtered_func_data ... done
Removing mean image ... done
Reading data file /mnt/hgfs/melodicdesk/NiftiPatientData/C-AVW020312-nifti/C-A_Rest_15_3_Warp2std_2mmResample_3mmFWHM.ica/reg_standard/filtered_func_data ... done
Removing mean image ... done
Reading data file /mnt/hgfs/melodicdesk/NiftiPatientData/C-BVW030212-nifti/C-B_Rest_15_3_Warp2std_2mmResample_3mmFWHM.ica/reg_standard/filtered_func_data ... done
Removing mean image ... done
Reading data file /mnt/hgfs/melodicdesk/NiftiPatientData/C-CVW051311-nifti/C-CVW051311_Rest_15_3_Warp2std_2mmResample_3mmFWHM.ica/reg_standard/filtered_func_data ... done
Removing mean image ... done
Reading data file /mnt/hgfs/melodicdesk/NiftiPatientData/C-DVW052011-nifti/C-D_Rest__15_3_Warp2std_2mmResample_3mmFWHM.ica/reg_standard/filtered_func_data ... done
Removing mean image ... done
Reading data file /mnt/hgfs/melodicdesk/NiftiPatientData/C-EVW060311-nifti/C-E_Rest_15_3_Warp2std_2mmResample_3mmFWHM.ica/reg_standard/filtered_func_data ... done
Removing mean image ... done
Reading data file /mnt/hgfs/melodicdesk/NiftiPatientData/C-FVW090911-nifti/C-F_Rest_15_3_Warp2std_2mmResample_3mmFWHM.ica/reg_standard/filtered_func_data ... done
Removing mean image ... done
Reading data file /mnt/hgfs/melodicdesk/NiftiPatientData/D-AVW012012-nifti/D-A_Rest_15_3_Warp2std_2mmResample_3mmFWHM.ica/reg_standard/filtered_func_data ... done
Removing mean image ... done
Reading data file /mnt/hgfs/melodicdesk/NiftiPatientData/D-BVW021012-nifti/D-B_Rest_15_3_Warp2std_2mmResample_3mmFWHM.ica/reg_standard/filtered_func_data ... done
Removing mean image ... done
Reading data file /mnt/hgfs/melodicdesk/NiftiPatientData/D-CVW021612-nifti/D-C_Rest_15_3_Warp2std_2mmResample_3mmFWHM.ica/reg_standard/filtered_func_data ... done
Removing mean image ... done
Reading data file /mnt/hgfs/melodicdesk/NiftiPatientData/D-DVW030911JM-nifti/D-D_Rest_15_3_Warp2std_2mmResample_3mmFWHM.ica/reg_standard/filtered_func_data ... done
Removing mean image ... done
Data size : 1635 x 286456
Starting PCA ... terminate called after throwing an instance of 'std::bad_alloc'
what(): St9bad_alloc
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