Hi,
Just to add to this - unless you are running SGE (Sun Grid Engine)
then you will not get parallel processes running. FSL is currently
not multi-threaded and requires SGE to distribute processes over
multiple cores/CPUs.
All the best,
Mark
On 27 Apr 2012, at 18:04, Ivana Drobnjak wrote:
> Hello,
>
> If the 7 files were possum.o1223.1, possum.o1223.2, possum.o1223.3 ... possum.o1223.7 , see inside them and if they all say that the process is finished then it is all fine and your job ran on 7 processors.
>
> there should be only .sh.o file
>
>
> Ivana
>
>
> On 27 Apr 2012, at 17:55, Ilia M wrote:
>
>> There are 7 .o files and 1 .sh.o file.
>>
>> Does this mean that 7 processor cores were used?
>>
>> Or 7 threads?
>>
>> (By the way, your reply took 3 minutes! Impressive)
>>
>> Your reply took 3 minutes, amazing.
>> On Fri, 27 Apr 2012 17:47:29 +0100, Ivana Drobnjak <[log in to unmask]> wrote:
>>
>>> the way to check this is to go to the logs directory and check how many .o files you have. there should be one per processor
>>>
>>> Ivana
>>>
>>>
>>> On 27 Apr 2012, at 17:44, Ilia M wrote:
>>>
>>>> Hello all,
>>>>
>>>> After setting the "CPU" setting to multiples of one (4,6,8, etc), possum still shows up as only 1 process when running "top" from linux.
>>>>
>>>> Is this correct?
>>>>
>>>> The "%CPU" field never goes above 100 either (usually stays in the nineties).
>>>>
>>>> It doesn't look like POSSUM is using more than one CPU.
>>>>
>>>> Installed CPU: Intel(R) Xeon(R) CPU X5680 @ 3.33GHz (6 core w/ hyper-threading)
>>>>
>>
>
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